Protein ZmIAA16
ZmIAA16 is a protein in the Aux/IAA family.
Information
Coreg Name: ZmIAA16
Species: Maize
Coreg Family: Aux/IAA
Gene Name(Synonym): IAA23
Uniprot ID: C0HFR3
Subgenome: 1

Protein ZmIAA16

ZmIAA16 is a protein in the Aux/IAA family.

Overview of domains present in v5 transcripts
PF02309
Zm00001eb239550_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d016277DAPseq no logo sequence fimo position
Zm00001d016277DAPseq no logo sequence fimo position
Zm00001d016277ChIPseq no logo sequence fimo position
Zm00001d016277PChIPseq no logo sequence fimo position

Interactions where ZmIAA16 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmIAA16 is the target  
Expand


There are 85 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb239550_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MGDAAETNKTLHNWMGEPRPRSSDQRDEEETLQLSLGLPGGGASAGGGVAPAAWRMLPARDEEMRSAAAVVDTSLLSLGY
SAPAFSPRSPGKAKGSPAAATENALASTNNASQRRSPNTPVIGWPPVRAFRRNLATSSRASLEHQNGKKEDKPEQTTKRA
PFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGD
RVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLTAPPGQKRTVTECPVFTS

MGDAAETNKTLHNWMGEPRPRSSDQRDEEETLQLSLGLPGGGASAGGGVAPAAWRMLPARDEEMRSAAAVVDTSLLSLGY
SAPAFSPRSPGKAKGSPAAATENALASTNNASQRRSPNTPVIGWPPVRAFRRNLATSSRASLEHQNGKKEDKPEQTTKRA
PFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGD
RVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLTAPPGQKRTVTECPVFTS

MGDAAETNKTLHNWMGEPRPRSSDQRDEEETLQLSLGLPGGGASAGGGVAPAAWRMLPARDEEMRSAAAVVDTSLLSLGY
SAPAFSPRSPGKAKGSPAAATENALASTNNASQRRSPNTPVIGWPPVRAFRRNLATSSRASLEHQNGKKEDKPEQTTKRA
PFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGD
RVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLTAPPGQKRTVTECPVFTS

MGDAAETNKTLHNWMGEPRPRSSDQRDEEETLQLSLGLPGGGASAGGGVAPAAWRMLPARDEEMRSAAAVVDTSLLSLGY
SAPAFSPRSPGKAKGSPAAATENALASTNNASQRRSPNTPVIGWPPVRAFRRNLATSSRASLEHQNGKKEDKPEQTTKRA
PFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGD
RVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLTAPPGQKRTVTECPVFTS

MGDAAETNKTLHNWMGEPRPRSSDQRDEEETLQLSLGLPGGGASAGGGVAPAAWRMLPARDEEMRSAAAVVDTSLLSLGY
SAPAFSPRSPGKAKGSPAAATENALASTNNASQRRSPNTPVIGWPPVRAFRRNLATSSRASLEHQNGKKEDKPEQTTKRA
PFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGD
RVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLTAPPGQKRTVTECPVFTS

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02309
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

GGGCTGCCTGCTCACACTTCGCCAC...

GRMZM2G121309_T01 from maize genome v3


Related TFome: pUT1132

Amino Acid Sequence
Copy to clipboard

MGDAAETNKTLHNWMGEPRPRSSDQRDEEETLQLSLGLPGGGASAGGGVAPAAWRMLPARDEEMRSAAAVVDTSLLSLGY
SAPAFSPRSPGKAKGSPAAATENALASTNNASQRRSPNTPVIGWPPVRAFRRNLATSSRASLEHQNGKKEDKPEQTTKRA
PFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGD
RVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLTAPPGQKRTVTECPVFTS

Nucleotide Sequence
Copy to clipboard
     
Expand

ACCCCAACCCAACCCCCTGCCGCGC...

Zm00001d016277_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MGDAAETNKTLHNWMGEPRPRSSDQRDEEETLQLSLGLPGGGASAGGGVAPAAWRMLPARDEEMRSAAAVVDTSLLSLGY
SAPAFSPRSPGKAKGSPAAATENALASTNNASQRRSPNTPVIGWPPVRAFRRNLATSSRASLEHQNGKKEDKPEQTTKRA
PFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGD
RVLVGDVPWGLTSVIANTCRMFVSSVKRLRVLKTSDLSSSLTAPPGQKRTVTECPVFTS

Nucleotide Sequence
Copy to clipboard
     
Expand

ACCCCAACCCAACCCCCTGCCGCGC...

Zm00001d016277_T002 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MGDAAETNKTLHNWMGEPRPRSSDQRDEEETLQLSLGLPGGGASAGGGVAPAAWRMLPARDEEMRSAAAVVDTSLLSLGY
SAPAFSPRSPGKAKGSPAAATENALASTNNASQRRSPNTPVIGWPPVRAFRRNLATSSRASLEHQNGKKEDKPEQTTKRA
PFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGD
RVLVGDVPWGLTSVIANTCRMFVSSVKRLRVLKTSDLSSSLTAPPGQKRTVTECPVFTS

Nucleotide Sequence
Copy to clipboard
     
Expand

GGGCTGCCTGCTCACACTTCGCCAC...

Zm00001d016277_T003 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MLPARDEEMRSAAAVVDTSLLSLGYSAPAFSPRSPGKAKGSPAAATENALASTNNASQRRSPNTPVIGWPPVRAFRRNLA
TSSRASLEHQNGKKEDKPEQTTKRAPFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQ
EEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLTAPPGQKRTVTECPVFTS

Nucleotide Sequence
Copy to clipboard
     
Expand

GAGGCCGAGGTCGAGCGACCAGCGC...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26